BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB015B11LP1|AL426802
(922 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1318 1452 0.0
>3x_Contig1318
Length = 8566
Score = 1452 bits (730), Expect = 0.0
Identities = 739/742 (99%)
Strand = Plus / Plus
Query: 1 agctaacacatatagaattaacgattgcacaatcccctttacaacatataactccacgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7818 agctaacacatatagaattaacgattgcacaatcccctttacaacatataactccacgca 7877
Query: 61 aagtatgacaaggactttagaactactacaggagttaaccaatttgatcagactggagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7878 aagtatgacaaggactttagaactactacaggagttaaccaatttgatcagactggagac 7937
Query: 121 aaatgatggctctattgattccgaagtctttcaaaatgacaatgaactactaaactggga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7938 aaatgatggctctattgattccgaagtctttcaaaatgacaatgaactactaaactggga 7997
Query: 181 ccaaatattacagcaattaattgatctgatgaaacatgactatttatcaagaaaaaacat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7998 ccaaatattacagcaattaattgatctgatgaaacatgactatttatcaagaaaaaacat 8057
Query: 241 gatgattcaactcaaagccaaagagttgaatataaaggagttgaatatcgaagtggctaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8058 gatgattcaactcaaagccaaagagttgaatataaaggagttgaatatcgaagtggctaa 8117
Query: 301 tttaaagaagtctttgaaagaatttgggcacttaaaataccatttacataaacagcttga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8118 tttaaagaagtctttgaaagaatttgggcacttaaaataccatttacataaacagcttga 8177
Query: 361 gctgaacgacaaattacaacaacaagtggaacaatacaggaatgaattcagagaattgga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8178 gctgaacgacaaattacaacaacaagtggaacaatacaggaatgaattcagagaattgga 8237
Query: 421 atccgaaataaaagggattagggggagtatgccagataagaacattcgtcgttgatagaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8238 atccgaaataaaagggattagggggagtatgccagataagaacattcgtcgttgatagaa 8297
Query: 481 gcccttttttacaaattttggataaggtgctgtgactttacaagttcttactcaggcagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8298 gcccttttttacaaattttggataaggtgctgtgactttacaagttcttactcaggcagt 8357
Query: 541 ttttaaaggggaacaagcaagatattgcaaaatacgtgtgaaatataaaattcaacgtga 600
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 8358 ttttaaaggggaacaagcaagatattgcaaaatacgtgtgaaatataaaactcaacgtga 8417
Query: 601 accctgagctgtggactaataccaaggggtaagaataacattacaaaagcggtatatttt 660
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8418 accctgagctgtggactaataccaaggggtaagaataacattacaaaagcggtatatttc 8477
Query: 661 ctgtcagggataaacatgacggtataccatgatgtatatattttgttttgatcgtgggcc 720
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 8478 ctgtcagggataaacatgacggtataccatgatgtatatatttcgttttgatcgtgggcc 8537
Query: 721 tatcaataaatatatatatata 742
||||||||||||||||||||||
Sbjct: 8538 tatcaataaatatatatatata 8559
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,739
Number of Sequences: 1807
Number of extensions: 11739
Number of successful extensions: 194
Number of sequences better than 1.0e-20: 1
length of query: 922
length of database: 10,358,551
effective HSP length: 16
effective length of query: 906
effective length of database: 10,329,639
effective search space: 9358652934
effective search space used: 9358652934
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)